Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prom1O54990 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prom1O54990 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Prom1O54990 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Gm6433-201ENSMUST00000118634 875 ntBASIC20.22■□□□□ 0.83
Prom1O54990 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.22■□□□□ 0.83
Prom1O54990 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
Prom1O54990 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prom1O54990 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Prom1O54990 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.21■□□□□ 0.83
Prom1O54990 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Prom1O54990 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.21■□□□□ 0.83
Prom1O54990 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.21■□□□□ 0.83
Prom1O54990 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Prom1O54990 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Prom1O54990 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Prom1O54990 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Prom1O54990 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Prom1O54990 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prom1O54990 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prom1O54990 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prom1O54990 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prom1O54990 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prom1O54990 Gm21814-202ENSMUST00000203277 873 ntBASIC20.2■□□□□ 0.82
Prom1O54990 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Prom1O54990 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Prom1O54990 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prom1O54990 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.2■□□□□ 0.82
Prom1O54990 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
Prom1O54990 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prom1O54990 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prom1O54990 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prom1O54990 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.19■□□□□ 0.82
Prom1O54990 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prom1O54990 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prom1O54990 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.19■□□□□ 0.82
Prom1O54990 Gm30025-201ENSMUST00000218555 728 ntBASIC20.19■□□□□ 0.82
Prom1O54990 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prom1O54990 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.19■□□□□ 0.82
Prom1O54990 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Prom1O54990 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Prom1O54990 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prom1O54990 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Prom1O54990 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prom1O54990 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prom1O54990 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.18■□□□□ 0.82
Prom1O54990 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prom1O54990 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prom1O54990 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.18■□□□□ 0.82
Prom1O54990 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prom1O54990 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prom1O54990 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prom1O54990 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.18■□□□□ 0.82
Prom1O54990 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.17■□□□□ 0.82
Prom1O54990 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Prom1O54990 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.17■□□□□ 0.82
Prom1O54990 Gm11539-201ENSMUST00000119837 557 ntBASIC20.17■□□□□ 0.82
Prom1O54990 Gm13436-201ENSMUST00000120418 567 ntBASIC20.17■□□□□ 0.82
Prom1O54990 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.17■□□□□ 0.82
Prom1O54990 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.17■□□□□ 0.82
Prom1O54990 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Prom1O54990 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prom1O54990 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Prom1O54990 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.16■□□□□ 0.82
Prom1O54990 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prom1O54990 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prom1O54990 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms