Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.56■□□□□ 0.24
Rnf13O54965 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf13O54965 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf13O54965 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf13O54965 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Rnf13O54965 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Gm43173-201ENSMUST00000202246 593 ntBASIC16.55■□□□□ 0.24
Rnf13O54965 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf13O54965 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Rnf13O54965 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Gm12821-201ENSMUST00000120022 600 ntBASIC16.54■□□□□ 0.24
Rnf13O54965 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf13O54965 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.54■□□□□ 0.24
Rnf13O54965 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf13O54965 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf13O54965 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rnf13O54965 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf13O54965 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rnf13O54965 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf13O54965 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf13O54965 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf13O54965 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rnf13O54965 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf13O54965 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf13O54965 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rnf13O54965 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf13O54965 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf13O54965 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf13O54965 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.52■□□□□ 0.24
Rnf13O54965 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rnf13O54965 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf13O54965 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Rnf13O54965 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf13O54965 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf13O54965 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf13O54965 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf13O54965 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf13O54965 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.51■□□□□ 0.23
Rnf13O54965 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rnf13O54965 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf13O54965 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf13O54965 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf13O54965 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rnf13O54965 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf13O54965 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf13O54965 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms