Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Trove2O08848 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Gm11421-201ENSMUST00000122124 294 ntBASIC18.71■□□□□ 0.59
Trove2O08848 Smad6-203ENSMUST00000179458 273 ntBASIC18.71■□□□□ 0.59
Trove2O08848 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Gm6139-201ENSMUST00000079261 882 ntBASIC18.71■□□□□ 0.59
Trove2O08848 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trove2O08848 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trove2O08848 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trove2O08848 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Trove2O08848 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.7■□□□□ 0.58
Trove2O08848 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.7■□□□□ 0.58
Trove2O08848 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trove2O08848 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trove2O08848 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.69■□□□□ 0.58
Trove2O08848 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trove2O08848 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trove2O08848 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trove2O08848 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.67■□□□□ 0.58
Trove2O08848 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.67■□□□□ 0.58
Trove2O08848 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trove2O08848 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trove2O08848 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Fst-202ENSMUST00000223640 2612 ntBASIC18.66■□□□□ 0.58
Trove2O08848 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.66■□□□□ 0.58
Trove2O08848 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trove2O08848 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trove2O08848 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trove2O08848 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trove2O08848 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trove2O08848 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Trove2O08848 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trove2O08848 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trove2O08848 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.64■□□□□ 0.57
Trove2O08848 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms