Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3aO08759 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ube3aO08759 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3aO08759 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3aO08759 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3aO08759 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3aO08759 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3aO08759 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3aO08759 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.72■□□□□ 0.75
Ube3aO08759 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.72■□□□□ 0.75
Ube3aO08759 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ube3aO08759 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3aO08759 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3aO08759 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
Ube3aO08759 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.72■□□□□ 0.75
Ube3aO08759 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ube3aO08759 Fst-202ENSMUST00000223640 2612 ntBASIC19.72■□□□□ 0.75
Ube3aO08759 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Ube3aO08759 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.71■□□□□ 0.75
Ube3aO08759 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.71■□□□□ 0.75
Ube3aO08759 Gm6139-201ENSMUST00000079261 882 ntBASIC19.71■□□□□ 0.75
Ube3aO08759 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ube3aO08759 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3aO08759 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ube3aO08759 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ube3aO08759 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3aO08759 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3aO08759 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3aO08759 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3aO08759 Mir7075-201ENSMUST00000184187 82 ntBASIC19.69■□□□□ 0.74
Ube3aO08759 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3aO08759 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Ube3aO08759 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Ube3aO08759 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.69■□□□□ 0.74
Ube3aO08759 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Ube3aO08759 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.68■□□□□ 0.74
Ube3aO08759 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ube3aO08759 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ube3aO08759 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.68■□□□□ 0.74
Ube3aO08759 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ube3aO08759 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3aO08759 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.67■□□□□ 0.74
Ube3aO08759 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.67■□□□□ 0.74
Ube3aO08759 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ube3aO08759 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3aO08759 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ube3aO08759 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.66■□□□□ 0.74
Ube3aO08759 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Ube3aO08759 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Ube3aO08759 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.66■□□□□ 0.74
Ube3aO08759 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ube3aO08759 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ube3aO08759 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3aO08759 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms