Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Gm7290-201ENSMUST00000104990 617 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Gm12918-201ENSMUST00000120234 636 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Gm15710-201ENSMUST00000121821 636 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Gm5075-201ENSMUST00000196916 622 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Gm6211-202ENSMUST00000167849 925 ntBASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Gm37179-201ENSMUST00000194862 823 ntBASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.04■□□□□ 0.16
Trav13d-3J3QMG8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-3J3QMG8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13d-3J3QMG8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-3J3QMG8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Grk6-206ENSMUST00000224995 2971 ntBASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Fst-202ENSMUST00000223640 2612 ntBASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav13d-3J3QMG8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms