Protein–RNA interactions for Protein: F6VRN1

Smgc, Submandibular gland protein C (Fragment), mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmgcF6VRN1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmgcF6VRN1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmgcF6VRN1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SmgcF6VRN1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SmgcF6VRN1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SmgcF6VRN1 Gm6420-201ENSMUST00000193885 723 ntBASIC18.33■□□□□ 0.52
SmgcF6VRN1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.33■□□□□ 0.52
SmgcF6VRN1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SmgcF6VRN1 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.33■□□□□ 0.52
SmgcF6VRN1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SmgcF6VRN1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SmgcF6VRN1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.32■□□□□ 0.52
SmgcF6VRN1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.32■□□□□ 0.52
SmgcF6VRN1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmgcF6VRN1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.31■□□□□ 0.52
SmgcF6VRN1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmgcF6VRN1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Gm10033-202ENSMUST00000211874 928 ntBASIC18.3■□□□□ 0.52
SmgcF6VRN1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SmgcF6VRN1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.3■□□□□ 0.52
SmgcF6VRN1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Nespas-201ENSMUST00000143738 1083 ntBASIC18.29■□□□□ 0.52
SmgcF6VRN1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmgcF6VRN1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmgcF6VRN1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmgcF6VRN1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SmgcF6VRN1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Gm7514-201ENSMUST00000209475 934 ntBASIC18.27■□□□□ 0.52
SmgcF6VRN1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmgcF6VRN1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SmgcF6VRN1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SmgcF6VRN1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.27■□□□□ 0.51
SmgcF6VRN1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SmgcF6VRN1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmgcF6VRN1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms