Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.74■□□□□ 0.59
Atf6F6VAN0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6F6VAN0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.72■□□□□ 0.59
Atf6F6VAN0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6F6VAN0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6F6VAN0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Atf6F6VAN0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.71■□□□□ 0.58
Atf6F6VAN0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Gm15039-201ENSMUST00000118914 875 ntBASIC18.7■□□□□ 0.58
Atf6F6VAN0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6F6VAN0 Fst-202ENSMUST00000223640 2612 ntBASIC18.7■□□□□ 0.58
Atf6F6VAN0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6F6VAN0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atf6F6VAN0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms