Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.89■□□□□ 0.45
Gm28729A0A1B0GSW2 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Gm43799-201ENSMUST00000201845 579 ntBASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Gm28729A0A1B0GSW2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28729A0A1B0GSW2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28729A0A1B0GSW2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28729A0A1B0GSW2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28729A0A1B0GSW2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28729A0A1B0GSW2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28729A0A1B0GSW2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm21814-202ENSMUST00000203277 873 ntBASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms