Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcna-ps2A0A140T8V5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcna-ps2A0A140T8V5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcna-ps2A0A140T8V5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.33■□□□□ 0.53
Pcna-ps2A0A140T8V5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcna-ps2A0A140T8V5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Gm7514-201ENSMUST00000209475 934 ntBASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcna-ps2A0A140T8V5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Pcna-ps2A0A140T8V5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcna-ps2A0A140T8V5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcna-ps2A0A140T8V5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcna-ps2A0A140T8V5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms