Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav13n-4A0A0G2JG01 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Grk6-206ENSMUST00000224995 2971 ntBASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-4A0A0G2JG01 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-4A0A0G2JG01 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-4A0A0G2JG01 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm5408-201ENSMUST00000197998 747 ntBASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-4A0A0G2JG01 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm10653-202ENSMUST00000139570 835 ntBASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-4A0A0G2JG01 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-4A0A0G2JG01 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms