Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav13n-2A0A0G2JF93 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-2A0A0G2JF93 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm9870-201ENSMUST00000063874 645 ntBASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm10232-201ENSMUST00000089221 720 ntBASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trav13n-2A0A0G2JF93 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav13n-2A0A0G2JF93 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms