Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms