Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-4A0A0B4J1K2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm7290-201ENSMUST00000104990 617 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm12918-201ENSMUST00000120234 636 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm15710-201ENSMUST00000121821 636 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm6211-202ENSMUST00000167849 925 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm5075-201ENSMUST00000196916 622 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-4A0A0B4J1K2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-4A0A0B4J1K2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9-4A0A0B4J1K2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9-4A0A0B4J1K2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9-4A0A0B4J1K2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm12933-201ENSMUST00000120203 872 ntBASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm10602-201ENSMUST00000098239 609 ntBASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-4A0A0B4J1K2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms