Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv2A0A0B4J1G8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trbv2A0A0B4J1G8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv2A0A0B4J1G8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv2A0A0B4J1G8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Trbv2A0A0B4J1G8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv2A0A0B4J1G8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv2A0A0B4J1G8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm8493-201ENSMUST00000196881 489 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms