Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh7A0A0A6YY83 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pcdh7A0A0A6YY83 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Rab3c-203ENSMUST00000224180 967 ntBASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh7A0A0A6YY83 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Tgds-204ENSMUST00000228543 1594 ntBASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdh7A0A0A6YY83 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Gm44549-201ENSMUST00000208351 577 ntBASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh7A0A0A6YY83 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh7A0A0A6YY83 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Gm10602-201ENSMUST00000098239 609 ntBASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh7A0A0A6YY83 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh7A0A0A6YY83 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh7A0A0A6YY83 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh7A0A0A6YY83 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Gm2399-201ENSMUST00000104944 225 ntBASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdh7A0A0A6YY83 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms