Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-4A0A075B6B4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav6-4A0A075B6B4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trav6-4A0A075B6B4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-4A0A075B6B4 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.08□□□□□ -0.15
Trav6-4A0A075B6B4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-4A0A075B6B4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-4A0A075B6B4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Gm12933-201ENSMUST00000120203 872 ntBASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-4A0A075B6B4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Gm6211-202ENSMUST00000167849 925 ntBASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Gm10602-201ENSMUST00000098239 609 ntBASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-4A0A075B6B4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-4A0A075B6B4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms