Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Trav6n-7A0A075B6A6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm5408-201ENSMUST00000197998 747 ntBASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-7A0A075B6A6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6n-7A0A075B6A6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-7A0A075B6A6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-7A0A075B6A6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm22325-201ENSMUST00000158904 308 ntBASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm29257-201ENSMUST00000186115 639 ntBASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav6n-7A0A075B6A6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-7A0A075B6A6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav6n-7A0A075B6A6 Gm26524-201ENSMUST00000192339 390 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms