Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-3A0A075B6A4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Etf1-202ENSMUST00000180351 108 ntBASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Serp2-204ENSMUST00000228055 705 ntBASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav12d-3A0A075B6A4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-3A0A075B6A4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.62□□□□□ -0.23
Trav12d-3A0A075B6A4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-3A0A075B6A4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms