Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav12-3A0A075B648 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12-3A0A075B648 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12-3A0A075B648 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Gm7432-201ENSMUST00000210343 879 ntBASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-3A0A075B648 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Gm16437-201ENSMUST00000025669 507 ntBASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-3A0A075B648 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-3A0A075B648 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms