Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trav7n-4A0A075B620 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7n-4A0A075B620 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7n-4A0A075B620 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav7n-4A0A075B620 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7n-4A0A075B620 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7n-4A0A075B620 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav7n-4A0A075B620 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms