Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav1A0A075B5Z4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Gm18671-201ENSMUST00000214826 683 ntBASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav1A0A075B5Z4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav1A0A075B5Z4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav1A0A075B5Z4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.96■□□□□ 0.3
Trav1A0A075B5Z4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav1A0A075B5Z4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Gm42642-201ENSMUST00000200683 355 ntBASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav1A0A075B5Z4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav1A0A075B5Z4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Gm5874-201ENSMUST00000096101 508 ntBASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms