Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 AC116476.1-201ENSMUST00000226274 2318 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Mir92b-201ENSMUST00000102300 83 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm12135-201ENSMUST00000119170 466 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm25574-201ENSMUST00000175245 249 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm27512-201ENSMUST00000175328 126 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm4956-202ENSMUST00000178869 672 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm37070-201ENSMUST00000193272 460 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm43215-201ENSMUST00000199108 252 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm45026-201ENSMUST00000205292 833 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 AC211878.6-201ENSMUST00000221896 358 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 AC174797.2-203ENSMUST00000224017 716 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 AC161252.1-201ENSMUST00000225536 467 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 AC154795.1-201ENSMUST00000225611 364 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Dalir-201ENSMUST00000188773 2170 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm3883-201ENSMUST00000098119 3229 ntBASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sf3b2Q3UJB0 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC9.02□□□□□ -0.96
Sf3b2Q3UJB0 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Sf3b2Q3UJB0 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
Sf3b2Q3UJB0 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Sf3b2Q3UJB0 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Sf3b2Q3UJB0 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC9.02□□□□□ -0.96
Sf3b2Q3UJB0 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sf3b2Q3UJB0 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 AC154597.1-201ENSMUST00000224095 2713 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm24434-201ENSMUST00000104081 132 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm22676-201ENSMUST00000116972 129 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm14733-201ENSMUST00000117680 133 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm8648-201ENSMUST00000122457 221 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm26729-201ENSMUST00000180744 352 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm8604-201ENSMUST00000183150 965 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm29470-201ENSMUST00000188007 696 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm18352-201ENSMUST00000189113 902 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm37135-201ENSMUST00000192652 534 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm20770-201ENSMUST00000193474 694 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Mir6906-201ENSMUST00000198998 58 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm18467-201ENSMUST00000208805 434 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm3266-201ENSMUST00000217832 591 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 AC159205.4-201ENSMUST00000225964 704 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 n-R5s97-201ENSMUST00000082585 113 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Sf3b2Q3UJB0 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms