Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Mirt2-201ENSMUST00000175179 285 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm34224-201ENSMUST00000204606 364 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm45249-201ENSMUST00000211021 348 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm16074-201ENSMUST00000119524 444 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm25605-201ENSMUST00000158364 124 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm20396-201ENSMUST00000173358 745 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm8595-201ENSMUST00000118250 630 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm16571-201ENSMUST00000159112 291 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm21728-201ENSMUST00000188442 695 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm21889-201ENSMUST00000188487 695 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm21920-201ENSMUST00000190042 695 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm36993-201ENSMUST00000192983 2980 ntBASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.51□□□□□ -1.37
Col6a3E9PWQ3 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 AC153955.4-201ENSMUST00000217069 2752 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm11878-201ENSMUST00000117908 400 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm44225-201ENSMUST00000203582 186 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm18791-201ENSMUST00000204611 726 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm17950-201ENSMUST00000214617 646 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms