Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm44286-201ENSMUST00000204098 1487 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm25093-201ENSMUST00000103993 132 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm25311-201ENSMUST00000104136 132 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm13878-201ENSMUST00000117986 577 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm6461-201ENSMUST00000120015 633 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm13940-201ENSMUST00000121023 301 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Mir1930-201ENSMUST00000158799 84 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm3344-201ENSMUST00000169610 603 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm29354-201ENSMUST00000187613 696 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm37191-201ENSMUST00000193346 388 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm44227-201ENSMUST00000203576 241 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC133203.1-201ENSMUST00000228241 301 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm45516-201ENSMUST00000211588 4182 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Vps53Q8CCB4 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 AC164567.3-201ENSMUST00000217743 2869 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm13798-201ENSMUST00000118285 139 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm9439-201ENSMUST00000119554 973 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm14612-201ENSMUST00000121522 881 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Mir378d-201ENSMUST00000184232 110 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm18789-201ENSMUST00000216115 550 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm36758-201ENSMUST00000222594 310 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms