Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.59□□□□□ -1.51
VhlP40338 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
VhlP40338 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VhlP40338 Gm18781-201ENSMUST00000211252 924 ntBASIC5.59□□□□□ -1.51
VhlP40338 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.59□□□□□ -1.51
VhlP40338 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.59□□□□□ -1.51
VhlP40338 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC5.59□□□□□ -1.51
VhlP40338 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC5.59□□□□□ -1.51
VhlP40338 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
VhlP40338 AC157571.1-201ENSMUST00000222014 520 ntBASIC5.59□□□□□ -1.51
VhlP40338 AC187103.4-201ENSMUST00000225399 300 ntBASIC5.59□□□□□ -1.51
VhlP40338 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.59□□□□□ -1.51
VhlP40338 CT009515.1-201ENSMUST00000228127 586 ntBASIC5.59□□□□□ -1.51
VhlP40338 CT025630.2-201ENSMUST00000228293 487 ntBASIC5.59□□□□□ -1.51
VhlP40338 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VhlP40338 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VhlP40338 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
VhlP40338 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VhlP40338 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VhlP40338 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VhlP40338 Gm18451-201ENSMUST00000196759 1719 ntBASIC5.59□□□□□ -1.51
VhlP40338 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VhlP40338 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
VhlP40338 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VhlP40338 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
VhlP40338 CT010453.1-201ENSMUST00000226795 2201 ntBASIC5.59□□□□□ -1.52
VhlP40338 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VhlP40338 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
VhlP40338 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VhlP40338 AC107763.1-202ENSMUST00000225021 2663 ntBASIC5.59□□□□□ -1.52
VhlP40338 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
VhlP40338 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VhlP40338 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.59□□□□□ -1.52
VhlP40338 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.58□□□□□ -1.52
VhlP40338 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VhlP40338 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Gm25725-201ENSMUST00000104528 130 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm6490-201ENSMUST00000111862 461 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm22152-201ENSMUST00000116966 125 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm11338-201ENSMUST00000120086 1160 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Gm25722-201ENSMUST00000157498 279 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm6726-201ENSMUST00000172786 681 ntBASIC5.58□□□□□ -1.52
VhlP40338 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC5.58□□□□□ -1.52
VhlP40338 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
VhlP40338 Gm27019-201ENSMUST00000183056 404 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm27373-201ENSMUST00000184017 184 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm29435-201ENSMUST00000191310 689 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm28070-201ENSMUST00000191502 445 ntBASIC5.58□□□□□ -1.52
VhlP40338 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.58□□□□□ -1.52
VhlP40338 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Gm7392-201ENSMUST00000217815 345 ntBASIC5.58□□□□□ -1.52
VhlP40338 Gm19217-201ENSMUST00000218238 328 ntBASIC5.58□□□□□ -1.52
VhlP40338 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.58□□□□□ -1.52
VhlP40338 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VhlP40338 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VhlP40338 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VhlP40338 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VhlP40338 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.58□□□□□ -1.52
VhlP40338 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.57□□□□□ -1.52
VhlP40338 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VhlP40338 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms