Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC8□□□□□ -1.13
Col1a1P11087 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm43725-201ENSMUST00000200122 369 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm44770-201ENSMUST00000205395 1264 ntBASIC8□□□□□ -1.13
Col1a1P11087 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC8□□□□□ -1.13
Col1a1P11087 Gm18914-201ENSMUST00000214625 616 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm46364-201ENSMUST00000218548 319 ntBASIC8□□□□□ -1.13
Col1a1P11087 AC151904.3-201ENSMUST00000219266 895 ntBASIC8□□□□□ -1.13
Col1a1P11087 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col1a1P11087 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col1a1P11087 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Gm44745-201ENSMUST00000206563 2723 ntBASIC8□□□□□ -1.13
Col1a1P11087 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col1a1P11087 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Gm12099-201ENSMUST00000118660 750 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm7058-201ENSMUST00000119209 902 ntBASIC8□□□□□ -1.13
Col1a1P11087 Mup-ps16-201ENSMUST00000120085 596 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8□□□□□ -1.13
Col1a1P11087 Gm27512-201ENSMUST00000175328 126 ntBASIC8□□□□□ -1.13
Col1a1P11087 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Gm7343-201ENSMUST00000194510 1061 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8□□□□□ -1.13
Col1a1P11087 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC8□□□□□ -1.13
Col1a1P11087 Gm18112-201ENSMUST00000219862 1195 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm9231-201ENSMUST00000220817 1009 ntBASIC8□□□□□ -1.13
Col1a1P11087 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col1a1P11087 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm22371-201ENSMUST00000104588 130 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm13352-201ENSMUST00000117515 262 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm12618-201ENSMUST00000121754 483 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Gm4997-201ENSMUST00000154056 360 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Mir6348-201ENSMUST00000183804 120 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC7.99□□□□□ -1.13
Col1a1P11087 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm28413-201ENSMUST00000189369 291 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Gm44111-201ENSMUST00000204649 399 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm19212-201ENSMUST00000216642 862 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Gm33312-201ENSMUST00000222443 332 ntBASIC7.99□□□□□ -1.13
Col1a1P11087 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col1a1P11087 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Col1a1P11087 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.99□□□□□ -1.13
Col1a1P11087 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col1a1P11087 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col1a1P11087 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms