Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm7341-201ENSMUST00000192183 926 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm37581-201ENSMUST00000192371 988 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 AC166323.1-201ENSMUST00000217756 367 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 AC109214.2-201ENSMUST00000220089 358 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 AC154838.1-201ENSMUST00000228944 911 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 CT030684.2-201ENSMUST00000228946 826 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm10123-201ENSMUST00000075723 490 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Mir7b-201ENSMUST00000083557 111 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm42572-201ENSMUST00000202292 3378 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Clp1Q99LI9 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Clp1Q99LI9 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.09□□□□□ -1.12
Clp1Q99LI9 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.09□□□□□ -1.12
Clp1Q99LI9 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Clp1Q99LI9 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Clp1Q99LI9 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Clp1Q99LI9 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm37074-201ENSMUST00000193444 1843 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm12955-201ENSMUST00000119689 957 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm15390-201ENSMUST00000120323 738 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm11474-201ENSMUST00000120814 277 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm15192-201ENSMUST00000121005 293 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm25660-201ENSMUST00000158470 104 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm6245-201ENSMUST00000164699 768 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm5511-201ENSMUST00000189380 802 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm4856-201ENSMUST00000192696 1091 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm37841-201ENSMUST00000195367 376 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm43849-201ENSMUST00000201086 215 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm44705-201ENSMUST00000206719 339 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm6230-201ENSMUST00000208077 780 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm45478-201ENSMUST00000209472 211 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Gm19174-201ENSMUST00000216944 956 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 AC154904.1-201ENSMUST00000219510 312 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Olfr654-201ENSMUST00000098173 1155 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Clp1Q99LI9 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC8.08□□□□□ -1.12
Clp1Q99LI9 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Clp1Q99LI9 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms