Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.8□□□□□ -1.48
Tsen54Q8C2A2 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Mir669e-201ENSMUST00000117003 119 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm6491-201ENSMUST00000118273 990 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm12477-201ENSMUST00000121221 571 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm22275-201ENSMUST00000122470 310 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm25277-201ENSMUST00000157266 324 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm24735-201ENSMUST00000158859 118 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm6428-201ENSMUST00000161062 345 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm20430-201ENSMUST00000172474 207 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm17965-201ENSMUST00000193904 517 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm35108-201ENSMUST00000194321 699 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm37585-201ENSMUST00000195440 280 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm33191-201ENSMUST00000195604 699 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm43590-201ENSMUST00000195987 387 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm44984-201ENSMUST00000207802 394 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm18601-201ENSMUST00000220831 634 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 AC163660.1-201ENSMUST00000223696 818 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 CT010472.1-201ENSMUST00000224000 704 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 AC134414.1-201ENSMUST00000228499 1221 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Snora9-201ENSMUST00000082579 133 ntBASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tsen54Q8C2A2 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm42820-201ENSMUST00000200084 3063 ntBASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Tsen54Q8C2A2 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms