Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Tpm1P58771 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Tpm1P58771 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.51□□□□□ -1.21
Tpm1P58771 Gm18060-201ENSMUST00000207407 564 ntBASIC7.51□□□□□ -1.21
Tpm1P58771 Gm44984-201ENSMUST00000207802 394 ntBASIC7.51□□□□□ -1.21
Tpm1P58771 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.51□□□□□ -1.21
Tpm1P58771 Gm9289-201ENSMUST00000221269 606 ntBASIC7.51□□□□□ -1.21
Tpm1P58771 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Tpm1P58771 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Tpm1P58771 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Tpm1P58771 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.51□□□□□ -1.21
Tpm1P58771 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Tpm1P58771 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Tpm1P58771 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.51□□□□□ -1.21
Tpm1P58771 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Tpm1P58771 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Tpm1P58771 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.51□□□□□ -1.21
Tpm1P58771 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.51□□□□□ -1.21
Tpm1P58771 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Tpm1P58771 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.51□□□□□ -1.21
Tpm1P58771 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Tpm1P58771 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Tpm1P58771 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Gm13196-201ENSMUST00000118297 379 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm14480-201ENSMUST00000118521 433 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm14645-201ENSMUST00000118597 417 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.5□□□□□ -1.21
Tpm1P58771 Gm22206-201ENSMUST00000158612 116 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Tpm1P58771 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.5□□□□□ -1.21
Tpm1P58771 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Tpm1P58771 Mir8094-201ENSMUST00000183361 117 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.5□□□□□ -1.21
Tpm1P58771 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm38305-201ENSMUST00000194825 223 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm19739-201ENSMUST00000195941 153 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm43157-201ENSMUST00000198223 412 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC7.5□□□□□ -1.21
Tpm1P58771 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Gm7392-201ENSMUST00000217815 345 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Tpm1P58771 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Tpm1P58771 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.5□□□□□ -1.21
Tpm1P58771 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Tpm1P58771 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Tpm1P58771 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.5□□□□□ -1.21
Tpm1P58771 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Tpm1P58771 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Tpm1P58771 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
Tpm1P58771 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Tpm1P58771 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm14248-201ENSMUST00000117790 544 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm8534-201ENSMUST00000118553 766 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm11318-201ENSMUST00000118640 961 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm11371-201ENSMUST00000120294 385 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm26528-201ENSMUST00000181965 283 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm7481-201ENSMUST00000182020 995 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm38164-201ENSMUST00000192810 330 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm36448-201ENSMUST00000199916 438 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm44705-201ENSMUST00000206719 339 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm44565-201ENSMUST00000208194 269 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.49□□□□□ -1.21
Tpm1P58771 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm35638-201ENSMUST00000220724 652 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Tpm1P58771 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Tpm1P58771 Gm25587-201ENSMUST00000082498 166 ntBASIC7.49□□□□□ -1.21
Tpm1P58771 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms