Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm7821-201ENSMUST00000117111 788 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm8550-201ENSMUST00000161621 653 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm22642-201ENSMUST00000175352 252 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Zfp950-206ENSMUST00000178819 171 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm28113-201ENSMUST00000188280 229 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm37920-201ENSMUST00000192952 749 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm43147-201ENSMUST00000196944 542 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm42883-201ENSMUST00000202594 222 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm18877-201ENSMUST00000207706 539 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm4548-201ENSMUST00000208487 509 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm5339-201ENSMUST00000210551 1102 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Mir129-2-201ENSMUST00000083577 90 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm24917-201ENSMUST00000083935 104 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Mir463-201ENSMUST00000093570 75 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Olfr687-201ENSMUST00000098154 938 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Gm16433-201ENSMUST00000062429 1984 ntBASIC8.1□□□□□ -1.11
Clp1Q99LI9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Clp1Q99LI9 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm3822-201ENSMUST00000201941 2935 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm37407-201ENSMUST00000194793 1316 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm4596-201ENSMUST00000117197 442 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm12636-201ENSMUST00000117395 624 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm13566-201ENSMUST00000117428 1142 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm14610-201ENSMUST00000118358 966 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm11891-201ENSMUST00000121241 619 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm23888-201ENSMUST00000122690 253 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm26025-201ENSMUST00000158655 271 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm6726-201ENSMUST00000172786 681 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm8993-201ENSMUST00000182182 983 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm21045-201ENSMUST00000183058 1020 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm29534-201ENSMUST00000187328 382 ntBASIC8.09□□□□□ -1.11
Clp1Q99LI9 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC8.09□□□□□ -1.11
Clp1Q99LI9 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms