Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm27972-201ENSMUST00000184720 137 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm37689-201ENSMUST00000193139 275 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm44982-201ENSMUST00000208795 471 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm5446-201ENSMUST00000091762 784 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm5843-201ENSMUST00000121631 476 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm22342-201ENSMUST00000122647 298 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm8524-201ENSMUST00000186232 379 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm18352-201ENSMUST00000189113 902 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm37629-201ENSMUST00000193635 1050 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm44856-201ENSMUST00000206639 304 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm17872-201ENSMUST00000222550 532 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm9800-201ENSMUST00000052615 336 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 AC158938.1-201ENSMUST00000225372 6720 ntBASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Vps53Q8CCB4 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm8872-201ENSMUST00000197475 1341 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm14990-201ENSMUST00000122354 445 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm22275-201ENSMUST00000122470 310 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm10913-201ENSMUST00000133732 463 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm2709-201ENSMUST00000142979 350 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Esd-ps-201ENSMUST00000170684 847 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm9114-201ENSMUST00000188558 997 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm36928-201ENSMUST00000192466 694 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm37325-201ENSMUST00000194971 694 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm42782-201ENSMUST00000197286 522 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm43926-201ENSMUST00000203978 430 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm43905-201ENSMUST00000204516 204 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms