Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm44809-201ENSMUST00000208305 993 ntBASIC8.27□□□□□ -1.09
Col4a1P02463 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC8.27□□□□□ -1.09
Col4a1P02463 AC154431.2-201ENSMUST00000225215 1055 ntBASIC8.27□□□□□ -1.09
Col4a1P02463 AC122290.1-201ENSMUST00000225631 1078 ntBASIC8.27□□□□□ -1.09
Col4a1P02463 AC154563.1-201ENSMUST00000228317 442 ntBASIC8.27□□□□□ -1.09
Col4a1P02463 AC139197.1-201ENSMUST00000228332 813 ntBASIC8.27□□□□□ -1.09
Col4a1P02463 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col4a1P02463 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col4a1P02463 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Col4a1P02463 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col4a1P02463 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Col4a1P02463 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Col4a1P02463 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Col4a1P02463 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm13207-201ENSMUST00000119862 773 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 Ighv1-44-201ENSMUST00000195597 352 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Gm36448-201ENSMUST00000199916 438 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Gm7492-201ENSMUST00000201745 725 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Gm6436-201ENSMUST00000077163 451 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.26□□□□□ -1.09
Col4a1P02463 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col4a1P02463 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Col4a1P02463 Gm37255-201ENSMUST00000193302 3060 ntBASIC8.26□□□□□ -1.09
Col4a1P02463 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.26□□□□□ -1.09
Col4a1P02463 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm12307-201ENSMUST00000120581 590 ntBASIC8.25□□□□□ -1.09
Col4a1P02463 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.25□□□□□ -1.09
Col4a1P02463 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm9027-201ENSMUST00000165914 661 ntBASIC8.25□□□□□ -1.09
Col4a1P02463 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm37604-201ENSMUST00000191749 1272 ntBASIC8.25□□□□□ -1.09
Col4a1P02463 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.25□□□□□ -1.09
Col4a1P02463 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.25□□□□□ -1.09
Col4a1P02463 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Col4a1P02463 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col4a1P02463 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 AC134577.3-201ENSMUST00000226490 3000 ntBASIC8.25□□□□□ -1.09
Col4a1P02463 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col4a1P02463 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8.24□□□□□ -1.09
Col4a1P02463 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm15967-201ENSMUST00000120027 1116 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm22820-201ENSMUST00000157205 329 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm26346-201ENSMUST00000157525 329 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col4a1P02463 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Col4a1P02463 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm4332-201ENSMUST00000196114 346 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col4a1P02463 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms