Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm13571-202ENSMUST00000151984 2127 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm26583-201ENSMUST00000181436 3684 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Cyp2j9-201ENSMUST00000055693 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Kin-201ENSMUST00000042512 1472 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm45873-201ENSMUST00000211865 1915 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Palb2-203ENSMUST00000106468 3304 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm13302-201ENSMUST00000119405 1849 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Xndc1-202ENSMUST00000106950 3131 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Cd300ld-201ENSMUST00000045075 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm25594-201ENSMUST00000102274 82 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm25501-201ENSMUST00000104429 132 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm15193-201ENSMUST00000120224 865 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm12007-201ENSMUST00000120978 597 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm13940-201ENSMUST00000121023 301 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm22198-201ENSMUST00000122659 307 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm23352-201ENSMUST00000158428 64 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm23024-201ENSMUST00000158770 292 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm24741-201ENSMUST00000158857 106 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Trp53-ps-201ENSMUST00000166597 141 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxd3P09027 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm37920-201ENSMUST00000192952 749 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm43856-201ENSMUST00000197004 369 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm44990-201ENSMUST00000203922 217 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm45316-201ENSMUST00000210128 162 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm9535-201ENSMUST00000218499 768 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 AC122539.2-201ENSMUST00000220207 404 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 AC159649.1-201ENSMUST00000220851 977 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm22830-201ENSMUST00000083772 130 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Snora57-201ENSMUST00000093658 148 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm44553-201ENSMUST00000206316 2037 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Vmn2r53-201ENSMUST00000170412 2421 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Enox2-203ENSMUST00000114912 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Olfr641-202ENSMUST00000213214 2379 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxd3P09027 AC131743.4-201ENSMUST00000221638 1553 ntBASIC6.6□□□□□ -1.35
Hoxd3P09027 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Hoxd3P09027 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxd3P09027 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms