Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm7113-201ENSMUST00000120477 958 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm2986-201ENSMUST00000121603 382 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm25550-201ENSMUST00000158079 128 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm6077-201ENSMUST00000196008 499 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Gm26967-201ENSMUST00000182878 2303 ntBASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Scn3aA2ASI5 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm43411-201ENSMUST00000196235 1579 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm24173-201ENSMUST00000104130 128 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm26422-201ENSMUST00000104276 132 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Mir1900-201ENSMUST00000122714 78 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm3344-201ENSMUST00000169610 603 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Mir6989-201ENSMUST00000184812 65 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm43235-201ENSMUST00000200121 297 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm26079-201ENSMUST00000104066 133 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm13176-201ENSMUST00000117910 477 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm5793-201ENSMUST00000119393 630 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Mir1953-201ENSMUST00000157866 89 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm29663-201ENSMUST00000186962 853 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm37380-201ENSMUST00000193752 397 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Gm18600-201ENSMUST00000207205 505 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Scn3aA2ASI5 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm12842-201ENSMUST00000117298 476 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm11504-201ENSMUST00000120211 173 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm14796-201ENSMUST00000121216 959 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms