Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm36948-201ENSMUST00000194708 3247 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Nr5a2-203ENSMUST00000192357 1859 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Nrxn3-203ENSMUST00000110133 2699 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Brd9-201ENSMUST00000099384 2407 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm43910-201ENSMUST00000204561 3241 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm42967-201ENSMUST00000198647 2312 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Arhgap10-203ENSMUST00000210922 2208 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm44547-201ENSMUST00000207793 1446 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 AC154734.1-201ENSMUST00000219957 2141 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm15666-202ENSMUST00000219490 2796 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm25938-201ENSMUST00000104139 166 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm12186-201ENSMUST00000119050 945 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm6630-201ENSMUST00000119199 454 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm2768-201ENSMUST00000121062 250 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm14577-201ENSMUST00000121134 256 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm4772-201ENSMUST00000122221 843 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC9.67□□□□□ -0.86
Trim35Q8C006 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm22492-201ENSMUST00000157192 297 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm17944-201ENSMUST00000186351 643 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm42623-201ENSMUST00000197225 379 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm45588-201ENSMUST00000211213 630 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 AC132315.1-201ENSMUST00000221771 390 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 CT025547.1-201ENSMUST00000225127 578 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 AC144819.1-201ENSMUST00000227015 620 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 AC154528.1-201ENSMUST00000228584 527 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm23095-201ENSMUST00000083446 107 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm37831-201ENSMUST00000191685 1787 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Srsf7-201ENSMUST00000063417 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Lrrcc1-201ENSMUST00000091325 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Suv39h1-202ENSMUST00000115637 2778 ntTSL 2 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm29293-201ENSMUST00000189416 2188 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm38227-201ENSMUST00000193036 1602 ntBASIC9.67□□□□□ -0.86
Trim35Q8C006 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Rnf43-201ENSMUST00000040089 3670 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim35Q8C006 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trim35Q8C006 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Prokr1-201ENSMUST00000050887 4075 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Fanca-201ENSMUST00000035495 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Epb41l3-201ENSMUST00000080208 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Dad1-202ENSMUST00000128231 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm24997-201ENSMUST00000157910 105 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm3531-201ENSMUST00000162698 489 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm3030-201ENSMUST00000163410 516 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Disp1-202ENSMUST00000171366 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Cd209b-203ENSMUST00000171635 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms