Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm24434-201ENSMUST00000104081 132 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm6446-201ENSMUST00000120604 818 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm9064-201ENSMUST00000163579 566 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm6693-201ENSMUST00000189583 813 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm3351-201ENSMUST00000193454 505 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 AC159205.4-201ENSMUST00000225964 704 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm37255-201ENSMUST00000193302 3060 ntBASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col16a1Q8BLX7 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm23739-201ENSMUST00000102295 108 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm12630-201ENSMUST00000121575 784 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Mir199b-201ENSMUST00000175066 110 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm27849-201ENSMUST00000183673 125 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Mir7220-201ENSMUST00000183978 60 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm18838-201ENSMUST00000204855 886 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC8.97□□□□□ -0.97
Col16a1Q8BLX7 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Gm28322-201ENSMUST00000185627 1475 ntBASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Gm22371-201ENSMUST00000104588 130 ntBASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Gm4997-201ENSMUST00000154056 360 ntBASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Gm26570-201ENSMUST00000180672 342 ntBASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 BC049739-201ENSMUST00000202626 660 ntBASIC8.96□□□□□ -0.97
Col16a1Q8BLX7 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms