Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm8192-201ENSMUST00000182196 958 ntBASIC6.17□□□□□ -1.42
H3f3aP84244 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.17□□□□□ -1.42
H3f3aP84244 Gm9114-201ENSMUST00000188558 997 ntBASIC6.17□□□□□ -1.42
H3f3aP84244 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.17□□□□□ -1.42
H3f3aP84244 Gm9652-201ENSMUST00000209345 163 ntBASIC6.17□□□□□ -1.42
H3f3aP84244 Gm2975-201ENSMUST00000209710 820 ntBASIC6.17□□□□□ -1.42
H3f3aP84244 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.17□□□□□ -1.42
H3f3aP84244 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
H3f3aP84244 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.17□□□□□ -1.42
H3f3aP84244 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H3f3aP84244 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
H3f3aP84244 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
H3f3aP84244 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3f3aP84244 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.17□□□□□ -1.42
H3f3aP84244 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H3f3aP84244 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H3f3aP84244 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H3f3aP84244 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H3f3aP84244 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3f3aP84244 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm22781-201ENSMUST00000104083 137 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm14865-201ENSMUST00000117523 494 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm14729-201ENSMUST00000118373 689 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm16044-201ENSMUST00000118475 450 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm15153-201ENSMUST00000119867 274 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm15316-201ENSMUST00000121082 421 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm14728-201ENSMUST00000122196 492 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm16248-201ENSMUST00000124238 243 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.16□□□□□ -1.42
H3f3aP84244 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3f3aP84244 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm42883-201ENSMUST00000202594 222 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm9240-201ENSMUST00000206527 742 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm8168-201ENSMUST00000209631 948 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.16□□□□□ -1.42
H3f3aP84244 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm24451-201ENSMUST00000083353 133 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
H3f3aP84244 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3f3aP84244 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
H3f3aP84244 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
H3f3aP84244 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3f3aP84244 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.16□□□□□ -1.42
H3f3aP84244 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
H3f3aP84244 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.15□□□□□ -1.42
H3f3aP84244 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms