Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.93□□□□□ -0.98
Hoxc9P09633 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxc9P09633 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.93□□□□□ -0.98
Hoxc9P09633 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxc9P09633 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxc9P09633 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxc9P09633 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm13006-201ENSMUST00000118683 214 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm12754-201ENSMUST00000121908 454 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm25550-201ENSMUST00000158079 128 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm27602-201ENSMUST00000183861 111 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm7463-201ENSMUST00000201541 547 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm45122-201ENSMUST00000206376 784 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm17849-201ENSMUST00000219788 853 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 AC156559.2-201ENSMUST00000224403 384 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm10205-201ENSMUST00000087431 234 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm8995-202ENSMUST00000208417 3490 ntBASIC8.92□□□□□ -0.98
Hoxc9P09633 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Hoxc9P09633 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hoxc9P09633 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm5125-201ENSMUST00000148614 624 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm26557-201ENSMUST00000180756 493 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm36935-201ENSMUST00000192526 292 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm5324-201ENSMUST00000208115 476 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Gm9110-201ENSMUST00000219035 617 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Cma2-202ENSMUST00000228263 857 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.91□□□□□ -0.98
Hoxc9P09633 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Hoxc9P09633 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hoxc9P09633 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Hoxc9P09633 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Hoxc9P09633 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hoxc9P09633 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Hoxc9P09633 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Hoxc9P09633 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms