Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm22256-201ENSMUST00000102291 107 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Apc-ps1-201ENSMUST00000119356 470 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm7494-201ENSMUST00000121248 441 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm37689-201ENSMUST00000193139 275 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm4751-201ENSMUST00000200620 1105 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm43905-201ENSMUST00000204516 204 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm2221-201ENSMUST00000209342 418 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 CT010453.2-201ENSMUST00000227005 483 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm2840-201ENSMUST00000048361 411 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm9800-201ENSMUST00000052615 336 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm22865-201ENSMUST00000083949 214 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cfap99A0A140LIX9 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm23768-201ENSMUST00000104440 131 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm14729-201ENSMUST00000118373 689 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm18808-201ENSMUST00000173316 462 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Mir199b-201ENSMUST00000175066 110 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm21877-201ENSMUST00000185640 694 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm37189-201ENSMUST00000192131 298 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 AC165349.1-201ENSMUST00000217896 424 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm16020-201ENSMUST00000084281 210 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm14976-201ENSMUST00000117055 1394 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cfap99A0A140LIX9 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms