Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm13878-201ENSMUST00000117986 577 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm12375-201ENSMUST00000119331 921 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm15129-201ENSMUST00000119673 279 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm13221-201ENSMUST00000121712 430 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm23657-201ENSMUST00000122623 294 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm3208-201ENSMUST00000168281 427 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm7412-201ENSMUST00000191692 605 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm44982-201ENSMUST00000208795 471 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm34424-201ENSMUST00000213400 782 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm46424-201ENSMUST00000221567 168 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm18960-201ENSMUST00000222962 713 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Glycam1-204ENSMUST00000228895 641 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdc40Q9DC48 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.49□□□□□ -1.37
Cdc40Q9DC48 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm25760-201ENSMUST00000103989 132 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm13156-201ENSMUST00000118348 321 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm13006-201ENSMUST00000118683 214 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms