Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm37295-201ENSMUST00000192186 109 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm38337-201ENSMUST00000193986 599 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm44566-201ENSMUST00000207638 304 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm19011-201ENSMUST00000221777 808 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm46379-201ENSMUST00000222551 265 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.83□□□□□ -1.32
Clrn1Q8K445 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clrn1Q8K445 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm25614-201ENSMUST00000104013 133 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm2735-201ENSMUST00000136133 277 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm5125-201ENSMUST00000148614 624 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm22636-201ENSMUST00000158142 275 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm44471-201ENSMUST00000197963 100 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm17838-201ENSMUST00000205872 876 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm45497-201ENSMUST00000211701 740 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.82□□□□□ -1.32
Clrn1Q8K445 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms