Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm24731-201ENSMUST00000158227 131 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm5853-201ENSMUST00000197183 632 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm9800-201ENSMUST00000052615 336 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 CT025645.1-201ENSMUST00000222760 4322 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Abcb1a-201ENSMUST00000047753 4997 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm24544-201ENSMUST00000103862 110 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Mir6348-201ENSMUST00000183804 120 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm14871-201ENSMUST00000119056 194 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm35108-201ENSMUST00000194321 699 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm33191-201ENSMUST00000195604 699 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 AC154532.1-201ENSMUST00000227860 965 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm43839-201ENSMUST00000196183 2325 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm11550-201ENSMUST00000118210 699 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm19060-201ENSMUST00000201959 421 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm45432-201ENSMUST00000210391 416 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm12444-201ENSMUST00000121512 877 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm37710-201ENSMUST00000193501 1274 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms