Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm25699-201ENSMUST00000082896 167 ntBASIC9.71□□□□□ -0.86
Trim35Q8C006 Samhd1-201ENSMUST00000057725 3926 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Gm7337-202ENSMUST00000181439 2655 ntBASIC9.71□□□□□ -0.86
Trim35Q8C006 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim35Q8C006 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Trpc7-201ENSMUST00000022023 3483 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Gm42653-201ENSMUST00000200644 2839 ntBASIC9.71□□□□□ -0.86
Trim35Q8C006 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim35Q8C006 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Cdh1-201ENSMUST00000000312 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Gm44070-201ENSMUST00000203389 2220 ntBASIC9.71□□□□□ -0.86
Trim35Q8C006 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Trim35Q8C006 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim35Q8C006 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trim35Q8C006 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Vps11-201ENSMUST00000034644 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Prune2-202ENSMUST00000223920 1803 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Cnr2-201ENSMUST00000068830 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Slc7a9-201ENSMUST00000032703 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Ankrd6-205ENSMUST00000108166 2321 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm11882-201ENSMUST00000121463 506 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm8425-201ENSMUST00000171395 769 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm21430-201ENSMUST00000182998 998 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Mir6973a-201ENSMUST00000183646 78 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm42511-201ENSMUST00000196160 234 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm4866-201ENSMUST00000197408 589 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm43532-201ENSMUST00000199389 3816 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Mir7227-201ENSMUST00000200408 59 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm2505-201ENSMUST00000200413 825 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm45034-201ENSMUST00000206831 482 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm8940-201ENSMUST00000212585 219 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm9318-201ENSMUST00000222444 438 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm9293-201ENSMUST00000223096 306 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Defa-ps18-201ENSMUST00000098889 371 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm8806-201ENSMUST00000120076 1407 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gtf2f2-201ENSMUST00000088922 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm9496-201ENSMUST00000191295 1601 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm42873-201ENSMUST00000196110 1726 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm42841-201ENSMUST00000199806 1932 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 AC134596.1-201ENSMUST00000222016 1922 ntBASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Crat-203ENSMUST00000102855 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 Polr3c-206ENSMUST00000154679 2406 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim35Q8C006 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim35Q8C006 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Top3a-203ENSMUST00000117743 2932 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Dclre1c-202ENSMUST00000100463 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Chid1-201ENSMUST00000026586 3964 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm12937-201ENSMUST00000118333 448 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms