Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC8.98□□□□□ -0.97
Hoxc9P09633 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.98□□□□□ -0.97
Hoxc9P09633 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Hoxc9P09633 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.98□□□□□ -0.97
Hoxc9P09633 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Hoxc9P09633 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Hoxc9P09633 Gm22351-201ENSMUST00000083925 107 ntBASIC8.98□□□□□ -0.97
Hoxc9P09633 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Hoxc9P09633 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.98□□□□□ -0.97
Hoxc9P09633 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.98□□□□□ -0.97
Hoxc9P09633 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxc9P09633 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm22953-201ENSMUST00000116724 101 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm25717-201ENSMUST00000158631 353 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm18799-201ENSMUST00000189104 913 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm28586-201ENSMUST00000189857 456 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm20223-201ENSMUST00000199932 805 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 AC157085.1-201ENSMUST00000216343 162 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm35619-201ENSMUST00000222548 600 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm9315-201ENSMUST00000222696 908 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.97□□□□□ -0.97
Hoxc9P09633 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Hoxc9P09633 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxc9P09633 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Hoxc9P09633 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Hoxc9P09633 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Hoxc9P09633 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.96□□□□□ -0.97
Hoxc9P09633 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.96□□□□□ -0.97
Hoxc9P09633 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Hoxc9P09633 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Hoxc9P09633 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Hoxc9P09633 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Hoxc9P09633 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm23426-201ENSMUST00000122483 318 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.96□□□□□ -0.98
Hoxc9P09633 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm18586-201ENSMUST00000217265 518 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.96□□□□□ -0.98
Hoxc9P09633 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Hoxc9P09633 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hoxc9P09633 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxc9P09633 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.95□□□□□ -0.98
Hoxc9P09633 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms