Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Gm27152-201ENSMUST00000183828 99 ntBASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Mir6933-201ENSMUST00000184982 81 ntBASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 AC159205.7-201ENSMUST00000225988 692 ntBASIC6.65□□□□□ -1.34
Col6a3E9PWQ3 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gm44950-201ENSMUST00000206403 2296 ntBASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gm15186-201ENSMUST00000119345 563 ntBASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gm4997-201ENSMUST00000154056 360 ntBASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Mir6899-201ENSMUST00000184798 64 ntBASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col6a3E9PWQ3 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm6181-201ENSMUST00000117187 264 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Olfr331-202ENSMUST00000170501 957 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm27887-201ENSMUST00000184367 102 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm18430-201ENSMUST00000197534 682 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm43560-201ENSMUST00000198100 773 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm18690-201ENSMUST00000204488 985 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm40692-201ENSMUST00000220411 491 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 CT030194.1-201ENSMUST00000225507 532 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm13491-201ENSMUST00000118267 235 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col6a3E9PWQ3 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm24473-201ENSMUST00000104483 131 ntBASIC6.63□□□□□ -1.35
Col6a3E9PWQ3 Gm13567-201ENSMUST00000118026 247 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms