Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 AC166574.5-201ENSMUST00000227438 1432 ntBASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 Gm2108-201ENSMUST00000165058 2177 ntBASIC5.89□□□□□ -1.47
Pfdn1Q9CWM4 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm13192-201ENSMUST00000101199 208 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm5915-201ENSMUST00000116136 454 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm14278-201ENSMUST00000117381 878 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm11318-201ENSMUST00000118640 961 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm11689-201ENSMUST00000120766 302 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm23598-201ENSMUST00000157262 144 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm23007-201ENSMUST00000158951 177 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm25193-201ENSMUST00000176615 97 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm37375-201ENSMUST00000193859 387 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm37385-201ENSMUST00000195223 387 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm20568-201ENSMUST00000197129 208 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm43798-201ENSMUST00000202056 394 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 AC124778.1-201ENSMUST00000216013 162 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm8290-201ENSMUST00000218202 477 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 AC167202.2-201ENSMUST00000220155 296 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 AC159205.2-201ENSMUST00000223759 816 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 AC126939.2-201ENSMUST00000225989 307 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm23037-201ENSMUST00000083874 324 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm16020-201ENSMUST00000084281 210 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm10029-201ENSMUST00000089635 330 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Pfdn1Q9CWM4 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Gm26012-201ENSMUST00000104411 128 ntBASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Gm23368-201ENSMUST00000116939 96 ntBASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Gm8812-201ENSMUST00000118496 412 ntBASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Gm13281-201ENSMUST00000120871 567 ntBASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.87□□□□□ -1.47
Pfdn1Q9CWM4 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms