Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 AC105958.1-201ENSMUST00000214783 2144 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm23979-201ENSMUST00000104071 128 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm22927-201ENSMUST00000104268 131 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm5319-201ENSMUST00000118965 873 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm11343-201ENSMUST00000120579 599 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm23450-201ENSMUST00000178285 91 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm17048-201ENSMUST00000179266 847 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm44669-201ENSMUST00000207774 1969 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm37295-201ENSMUST00000192186 109 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm29784-201ENSMUST00000196217 406 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm43089-201ENSMUST00000199162 275 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm44411-201ENSMUST00000204172 349 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm8250-201ENSMUST00000117398 774 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm12661-201ENSMUST00000118780 3335 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm7189-201ENSMUST00000119811 429 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm16027-201ENSMUST00000161618 758 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm24756-201ENSMUST00000177002 96 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Mir7211-201ENSMUST00000184071 63 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms