Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm13545-201ENSMUST00000119044 482 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm13877-201ENSMUST00000120614 417 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm7746-201ENSMUST00000120966 503 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm12903-201ENSMUST00000121015 544 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm24685-201ENSMUST00000157764 285 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm20637-201ENSMUST00000175715 462 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm17786-201ENSMUST00000182000 427 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm27762-201ENSMUST00000183417 109 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Mir7084-201ENSMUST00000183876 70 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.95□□□□□ -1.3
Hoxc11P31313 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm44253-201ENSMUST00000203387 628 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm2089-201ENSMUST00000218294 479 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxc11P31313 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.95□□□□□ -1.3
Hoxc11P31313 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxc11P31313 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxc11P31313 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm44286-201ENSMUST00000204098 1487 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm13771-201ENSMUST00000117988 238 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm13702-201ENSMUST00000118542 825 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm12944-201ENSMUST00000119262 463 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm15129-201ENSMUST00000119673 279 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm12477-201ENSMUST00000121221 571 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm13024-201ENSMUST00000121756 718 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm26321-201ENSMUST00000157740 242 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Mir7212-201ENSMUST00000184098 61 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm8101-201ENSMUST00000192796 478 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm37355-201ENSMUST00000193345 606 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm18995-201ENSMUST00000202981 520 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm18839-201ENSMUST00000204292 670 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm30646-201ENSMUST00000207662 180 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm9604-201ENSMUST00000211175 433 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.94□□□□□ -1.3
Hoxc11P31313 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms