Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
H2afb3S4R1G7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
H2afb3S4R1G7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb3S4R1G7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
H2afb3S4R1G7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Gm9988-201ENSMUST00000069786 435 ntBASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb3S4R1G7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms