Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1h3Q9Z0Y9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm715-201ENSMUST00000117865 831 ntBASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1h3Q9Z0Y9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1h3Q9Z0Y9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1h3Q9Z0Y9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nr1h3Q9Z0Y9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1h3Q9Z0Y9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1h3Q9Z0Y9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1h3Q9Z0Y9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.83■□□□□ 0.76
Nr1h3Q9Z0Y9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1h3Q9Z0Y9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1h3Q9Z0Y9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 Mir1199-201ENSMUST00000117015 119 ntBASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1h3Q9Z0Y9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms